Development and optimization of PMA-qPCR for the quantitative detection of viable but non-culturable Vibrio parahaemolyticus

  • PENG Linyuan ,
  • LIN Hong ,
  • WANG Jingxue
Expand
  • (College of Food Science and Engineering,Ocean University of China,Qingdao 266000,China)

Received date: 2021-04-16

  Revised date: 2021-05-12

  Online published: 2022-01-27

Abstract

Vibrio parahaemolyticus might turn to a viable but non-culturable (VBNC) state under some natural and food processing conditions where bacteria can hardly grow, which cannot be detected by conventional culture-based methods. Therefore, the development and optimization of the VBNC bacteria detection technology is significant for the prevention and control of V. parahaemolyticus infection. Based on the principle of propidium monoazide quantitative PCR (PMA-qPCR) assay to distinguish the live or death of bacteria according to the membrane integrity, the effect of multiple parameters in PMA-qPCR on the viable count was detected and the quantitative detection method of VBNC V.parahaemolyticus was optimized and established. The results indicated that the optimal treatment method was to incubate in dark with 15 mg/L of PMA for 10 min and followed by 15 min of strong light irradiation. Under the optimal conditions, DNA amplification of dead cells was effectively inhibited, and the accuracy of qPCR amplification was higher. The number of viable bacteria was significantly linear correlated with the Ct values of qPCR (R2=0.99). The detection limit of PMA-qPCR standard was from 29 to 2.90×108 CFU/mL, the recovery rate range was 92.97%-99.57%, and the standard deviation was 1.95%. In conclusion, the more accurate and reliable quantitative detection method for VBNC V. parahaemolyticus was established and provides an effective method for further research.

Cite this article

PENG Linyuan , LIN Hong , WANG Jingxue . Development and optimization of PMA-qPCR for the quantitative detection of viable but non-culturable Vibrio parahaemolyticus[J]. Food and Fermentation Industries, 2022 , 48(1) : 247 -252 . DOI: 10.13995/j.cnki.11-1802/ts.027703

References

[1] PIENAAR J A,SINGH A,BARNARD T G.The viable but non-culturable state in pathogenic Escherichia coli:A general review[J].African Journal of Laboratory Medicine,2016,5(1):1-9.
[2] DONG K,PAN H X,YANG D,et al.Induction,detection,formation,and resuscitation of viable but non-culturable state microorganisms[J].Comprehensive Reviews in Food Science and Food Safety,2020,19(1):149-183.
[3] XU H S,ROBERTS N,SINGLETON F L,et al.Survival and viability of nonculturable Escherichia coli and Vibrio cholerae in the estuarine and marine environment[J].Microbial Ecology,1982,8(4):313-323.
[4] RAZAFIMAHEFA R M,LUDWIG-BEGALL L F,LE GUYADER F S,et al.Optimisation of a PMAxxTM-RT-qPCR assay and the preceding extraction method to selectively detect infectious murine norovirus particles in mussels[J].Food and Environmental Virology,2021,13(1):93-106.
[5] DANIELS N A,RAY B,EASTON A,et al.Emergence of a new Vibrio parahaemolyticus serotype in raw oysters:A prevention quandary[J].JAMA,2000,284(12):1 541-1 545.
[6] YOON J H,LEE S Y.Characteristics of viable-but-nonculturable Vibrio parahaemolyticus induced by nutrient-deficiency at cold temperature[J].Critical Reviews in Food Science and Nutrition,2020,60(8):1 302-1 320.
[7] 张蕊蕊,聂新颖,廖红梅,等.热辅助超声波处理中VBNC态鼠伤寒沙门氏菌产生及其机制[J].中国食品学报,2020,20(5):12-18.
ZHANG R R,NIE X Y,LIAO H M,et al.Occurrence of viable but non-culturable state in Salmonella enterica serovar typhimurium during thermosonication and its mechanism[J].Journal of Chinese Institute of Food Science and Technology,2020,20(5):12-18.
[8] WASFI R,ABDELLATIF G R,ELSHISHTAWY H M,et al.First-time characterization of viable but non-culturable Proteus mirabilis:induction and resuscitation[J].Journal of Cellular and Molecular Medicine,2020,24(5):2 791-2 801.
[9] 田聪. 两种食源性致病菌VBNC状态诱导与分子检测技术研究[D].广州:华南理工大学,2013.
TIAN C.Induction and molecular detecting techniques research on VBNC of two foodborne pathogenic bacteria[D].Guangzhou:South China University of Technology,2013.
[10] 黄新新, 杨娟,郑江,等.PMA-qPCR法检测冷冻基质中非可培养状态(VBNC)副溶血性弧菌[J].微生物学通报,2018,45(4):934-940.
HUANG X X,YANG J,ZHENG J,et al.Propidium monoazide based real-time PCR to detect Vibrio parahaemolyticus in a viable but nonculturable state[J].Microbiology China,2018,45(4):934-940.
[11] 谷立慧, 钟青萍,方祥,等.“活的非可培养态”食源致病细菌的研究进展[J].食品与发酵工业,2016,42(2):270-274.
GU L H,ZHONG Q P,FANG X,et al.Research progress on the viable but non-culturable state of food-borne pathogenic bacteria[J].Food and Fermentation Industries,2016,42(2):270-274.
[12] NOCKER A,CHEUNG C Y,CAMPER A K.Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs.dead bacteria by selective removal of DNA from dead cells[J].Journal of Microbiological Methods,2006,67(2):310-320.
[13] 肖莉莉, 张昭寰,娄阳,等.叠氮溴化丙锭(PMA)在食源性致病菌检测中的应用[J].中国食品学报,2016,16(6):187-194.
XIAO L L,ZHANG Z H,LOU Y,et al.Application of propidium monoazide(PMA) for detection of foodborne pathogens[J].Journal of Chinese Institute of Food Science and Technology,2016,16(6):187-194.
[14] TSENG C C,HSIAO P K,CHANG K C,et al.Detection of viable antibiotic-resistant/sensitive Acinetobacter baumannii in indoor air by propidium monoazide quantitative polymerase chain reaction[J].Indoor Air,2015,25(5):475-487.
[15] GOLPAYEGANI A,DOURAGHI M,REZAEI F,et al.Propidium monoazide-quantitative polymerase chain reaction(PMA-qPCR) assay for rapid detection of viable and viable but non-culturable(VBNC) Pseudomonas aeruginosa in swimming pools[J].Journal of Environmental Health Science and Engineering,2019,17(1):407-416.
[16] KRALIK P,NOCKER A,PAVLIK I.Mycobacterium avium subsp. paratuberculosis viability determination using F57 quantitative PCR in combination with propidium monoazide treatment[J].International Journal of Food Microbiology,2010,141(S1):S80-S86.
[17] VAN FRANKENHUYZEN J K,TREVORS J T,LEE H,et al.Molecular pathogen detection in biosolids with a focus on quantitative PCR using propidium monoazide for viable cell enumeration[J].Journal of Microbiological Methods,2011,87(3):263-272.
[18] 陈卓君, 魏铭,林果,等.PMA-qPCR技术在发酵食品活菌计数中的应用[J].食品与发酵工业,2019,45(12):242-248.
CHEN Z J,WEI M,LIN G,et al.Application of PMA-qPCR in enumerating living microbes in fermented foods[J].Food and Fermentation Industries,2019,45(12):242-248.
[19] NOCKER A,SOSSA-FERNANDEZ P,BURR M D,et al.Use of propidium monoazide for live/dead distinction in microbial ecology[J].Applied and Environmental Microbiology,2007,73(16):5 111-5 117.
[20] YANEZ M A,NOCKER A,SORIA-SORIA E,et al.Quantification of viable Legionella pneumophila cells using propidium monoazide combined with quantitative PCR[J].Journal of Microbiological Methods,2011,85(2):124-130.
[21] ZHAO X H,WANG J,FORGHANI F,et al.Rapid detection of viable Escherichia coli O157 by coupling propidium monoazide with loop-mediated isothermal amplification[J].Journal of Microbiology and Biotechnology,2013,23(12):1 708-1 716.
[22] BEJ A K,PATTERSON D P,BRASHER C W,et al.Detection of total and hemolysin-producing Vibrio parahaemolyticus in shellfish using multiplex PCR amplification of tl,tdh and trh[J].Journal of Microbiological Methods,1999,36(3):215-225.
[23] BAE S,WUERTZ S.Rapid decay of host-specific fecal Bacteroidales cells in seawater as measured by quantitative PCR with propidium monoazide[J].Water Research,2009,43(19):4 850-4 859.
[24] NOCKER A,SOSSA K E,CAMPER A K.Molecular monitoring of disinfection efficacy using propidium monoazide in combination with quantitative PCR[J].Journal of Microbiological Methods,2007,70(2):252-260.
[25] LIU Y F,ZHONG Q P,WANG J,et al.Enumeration of Vibrio parahaemolyticus in VBNC state by PMA-combined real-time quantitative PCR coupled with confirmation of respiratory activity[J].Food Control,2018,91:85-91.
Outlines

/