Comparative analysis of bacterial community of high temperature Daqu with different storage periods based on in situ cultivation and traditional cultivation

  • ZOU Yunman ,
  • QIU Shuyi ,
  • ZHENG Jia ,
  • DAI Yifeng ,
  • WEI Chaoyang ,
  • YAN Yan ,
  • ZENG Xiangyong
Expand
  • 1(College of Liquor and Food Engineering, Guizhou University, Guiyang 550025, China)
    2(Guizhou Provincial Key Laboratory of Fermentation and Biopharmacy, Guiyang 550025, China)
    3(Key Laboratory of Wuliangye-Flavor Liquor Solid State Fermentation, China National Light Industry, Yibin 644000, China)

Received date: 2022-10-17

  Revised date: 2022-11-09

  Online published: 2023-08-31

Abstract

The present study was the first to isolate and screen bacteria in high temperature Daqu with five different storage periods based on in situ cultivation approach. The bacterial community composition cultured with in situ cultivation and traditional cultivation were compared and analyzed. The results showed that 15 genera and 36 species were isolated by in situ cultivation while only 5 genera and 17 species were obtained by traditional cultivation. In each Daqu with a different storage period, the diversity and richness of bacteria isolated by in situ cultivation were more abundant than those of traditional cultivation. Interestingly, the unique bacteria previously reported in Baijiu fermentation environment based on the culture-independent method were successfully isolated by in situ cultivation. Functional bacteria including Bacillus paramycoides, Bacillus vallismortis, Staphylococcus xylosus, Alcaligenes sp., Alcaligenes faecalis, Alcaligenes aquatilis, and Brevibacillus borstelensis obtained by in situ cultivation were rarely reported in Baijiu fermentation environment. In addition, although the dominant bacteria in high temperature Daqu with a 3-8 months storage period were similar and stable, the isolation frequency of the dominant genus was the highest in Daqu samples with six and eight months. Therefore, high temperature Daqu with six months or more storage period is suitable and applied in the subsequent brewing process. This study highlights the advantages of in situ cultivation and provides a new method and a novel pathway to screen functional microorganisms inhabiting the whole liquor brewing environment.

Cite this article

ZOU Yunman , QIU Shuyi , ZHENG Jia , DAI Yifeng , WEI Chaoyang , YAN Yan , ZENG Xiangyong . Comparative analysis of bacterial community of high temperature Daqu with different storage periods based on in situ cultivation and traditional cultivation[J]. Food and Fermentation Industries, 2023 , 49(15) : 38 -46 . DOI: 10.13995/j.cnki.11-1802/ts.034005

References

[1] 谢丹, 吴成, 程平言, 等.应用单分子实时测序技术解析酱香型白酒高温大曲制作过程细菌多样性[J].食品与发酵工业, 2022, 48(19):58-64.
XIE D, WU C, CHENG P Y, et al.Analysis of bacteria diversity during the production of high-temperature Daqu of Maotai-flavor Baijiu using SMRT technology[J].Food and Fermentation Industries, 2022, 48(19):58-64.
[2] XI X, YANG F, CHEN L, et al.Dynamic changes of bacteria communities in Moutai-flavour Daqu during storage analysed by next generation sequencing[J].Letters in Applied Microbiology, 2022, 75(6):1486-1496.
[3] LIU X, GUO K L, ZHANG H X.Determination of microbial diversity in Daqu, a fermentation starter culture of Maotai liquor, using nested PCR-denaturing gradient gel electrophoresis[J].World Journal of Microbiology and Biotechnology, 2012, 28(6):2375-2381.
[4] 左乾程, 黄永光, 郭敏, 等.酱香型白酒机械化制曲发酵细菌群落的演替[J].食品科学, 2021, 42(18):150-156.
ZUO Q C, HUANG Y G, GUO M, et al.Succession of bacterial community during mechanized fermentation of Maotai-flavor Daqu[J].Food Science, 2021, 42(18):150-156.
[5] 任爱容, 黄永光, 涂华彬.茅台镇酱香型白酒酿造大曲及环境中可培养细菌多样性及功能分析[J].食品科学, 2020, 41(14):195-202.
REN A R, HUANG Y G, TU H B.Diversity and function of culturable bacteria in Daqu and brewing environment of Moutai-fiavor Baijiu in Maotai town[J].Food Science, 2020, 41(14):195-202.
[6] AMANN R I, LUDWIG W, SCHLEIFER K H.Phylogenetic identification and in situ detection of individual microbial cells without cultivation[J].Microbiological Reviews, 1995, 59(1):143-169.
[7] 叶光斌, 罗惠波, 杨晓东, 等.基于免培养法研究泸州地区浓香型白酒窖泥原核微生物群落结构[J].食品科学, 2013, 34(17):176-181.
YE G B, LUO H B, YANG X D, et al.Community structure of prokaryotes in pit mud of Lu-flavor liquor from Luzhou prefecture based on culture-independent approach[J].Food Science, 2013, 34(17):176-181.
[8] 董雅舒, 刘仁胜, 胡贝, 等.PCR-DGGE技术在浓香型白酒窖池细菌菌群分析中的应用[J].酿酒科技, 2013(10):53-57.
DONG Y S, LIU R S, HU B, et al.Application of PCR-DGGE in the analysis of bacterial flora in Nong-flavor liquor pits[J].Liquor-Making Science & Technology, 2013(10):53-57.
[9] 任海伟, 孙一帆, 王希, 等.不同窖龄及位置浓香型白酒窖泥中细菌群落结构的差异性分析[J].食品与发酵工业, 2023,49(9):103-111.
REN H W, SUN Y F, WANG X, et al.Difference analysis of bacterial community structure in pit mud with different ages and position[J].Food and Fermentation Industries, 2023,49(9):103-111.
[10] TAN Y W, DU H, ZHANG H X, et al.Geographically associated fungus-bacterium interactions contribute to the formation of geography-dependent flavor during high-complexity spontaneous fermentation[J].Microbiology Spectrum, 2022,10(5):e01844.
[11] CHAUDHARY D K, KHULAN A, KIM J.Development of a novel cultivation technique for uncultured soil bacteria[J].Scientific Reports, 2019, 9:6666.
[12] ZHOU Y X, SU X B, ZHAO W Z, et al.Culture medium optimization for producing biomethane by coal anaerobic digestion[J].Journal of Biotechnology, 2022, 348:26-35.
[13] ZHANG Q Y, LUO W, YUAN Y J, et al.Characterization of the microbial community in a caproic acid-producing bacterial consortium (CAPBC) and optimization of a fermentative medium by taguchi design[J].Food Science and Technology Research, 2017, 23(5):651-660.
[14] 熊盈盈, 莫祯妮, 邱树毅, 等.未培养环境微生物培养方法的研究进展[J].微生物学通报, 2021, 48(5):1765-1779.
XIONG Y Y, MO Z N, QIU S Y, et al.Research progress on culture methods of uncultured environmental microorganisms[J].Microbiology China, 2021, 48(5):1765-1779.
[15] LEWIS W H, TAHON G, GEESINK P, et al.Innovations to culturing the uncultured microbial majority[J].Nature Reviews Microbiology, 2021, 19(4):225-240.
[16] PHAM V H T, KIM J.Cultivation of unculturable soil bacteria[J].Trends in Biotechnology, 2012, 30(9):475-484.
[17] 田甜, 李冬梅, 戴世鲲, 等.海洋环境中难培养微生物的寡营养培养[J].微生物学通报, 2009, 36(7):1031-1039.
TIAN T, LI D M, DAI S K, et al.Culture methods of the oligotrophic marine microbes[J].Microbiology, 2009, 36(7):1031-1039.
[18] UPHOFF H U, FELSKE A, FEHR W, et al.The microbial diversity in picoplankton enrichment cultures:A molecular screening of marine isolates[J].FEMS Microbiology Ecology, 2001, 35(3):249-258.
[19] NICHOLS D, CAHOON N, TRAKHTENBERG E M, et al.Use of ichip for high-throughput in situ cultivation of “uncultivable” microbial species[J].Applied and Environmental Microbiology, 2010, 76(8):2445-2450.
[20] BERDY B, SPOERING A L, LING L L, et al.In situ cultivation of previously uncultivable microorganisms using the ichip[J].Nature Protocols, 2017, 12(10):2232-2242.
[21] ATLAS R M.Handbook of Media for Environmental Microbiology[M].2nd ed.Boca Raton, FL:Taylor & Francis/CRC Press, 2005.
[22] 晋方佑, 李治滢, 王永霞, 等.云南程海湖可培养真菌多样性分析[J].应用与环境生物学报, 2013, 19(6):1025-1030.
JIN F Y, LI Z Y, WANG Y X, et al.Diversity of cultivable fungi isolated from the Chenghai Lake in Yunnan Province[J].Chinese Journal of Applied and Environmental Biology, 2013, 19(6):1025-1030.
[23] SUN W N, XIAO H Z, PENG Q, et al.Analysis of bacterial diversity of Chinese Luzhou-flavor liquor brewed in different seasons by Illumina MiSeq sequencing[J].Annals of Microbiology, 2016, 66(3):1293-1301.
[24] SHANG C H, LI Y J, ZHANG J, et al.Analysis of bacterial diversity in different types of daqu and fermented grains from Danquan distillery[J].Frontiers in Microbiology, 2022, 13:883122.
[25] 戴奕杰, 李宗军, 田志强.酱香型白酒大曲和糟醅的细菌多样性分析[J].食品科学, 2019, 40(4):152-159.
DAI Y J, LI Z J, TIAN Z Q.Analysis of bacterial diversity in Daqu and fermented grains for Maotai-flavor liquor[J].Food Science, 2019, 40(4):152-159.
[26] 刘庆涛, 康振, 堵国成.微生物酶法消除黄酒中氨基甲酸乙酯研究进展[J].生物工程学报, 2019, 35(4):567-576.
LIU Q T, KANG Z, DU G C.Advances in microbial enzymatic elimination of ethyl carbamate in Chinese rice wine[J].Chinese Journal of Biotechnology, 2019, 35(4):567-576.
[27] 陈梦圆, 刘学彬, 汪平, 等.产酯香功能菌对酱香型酒醅的影响[J].食品科学, 2018, 39(10):199-205.
CHEN M Y, LIU X B, WANG P, et al.Effects of an ester aroma-producing bacterial strain on Maotai-flavor fermented grains[J].Food Science, 2018, 39(10):199-205.
[28] ZHANG B, LIU Y, YANG H Y, et al.Biochemical properties and application of a novel β-1, 3-1, 4-glucanase from Paenibacillus barengoltzii[J].Food Chemistry, 2017, 234:68-75.
[29] 母应春, 姜丽, 苏伟.应用Illumina高通量测序技术分析3种酒曲中微生物多样性[J].食品科学, 2019, 40(14):115-122.
MU Y C, JIANG L, SU W.Analysis of microbial diversity in three rice wine kojis by Illumina high-throughput sequencing[J].Food Science, 2019, 40(14):115-122.
[30] TIWARI S, SINGH R, YADAV J, et al.Three-step purification and characterization of organic solvent-tolerant and alkali-thermo-tolerant xylanase from Bacillus paramycoides T4[MN370035][J].Catalysts, 2022, 12(7):749.
[31] SHEN T, LIU J, WU Q, et al.Increasing 2-furfurylthiol content in Chinese sesame-flavored Baijiu via inoculating the producer of precursor L-cysteine in Baijiu fermentation[J].Food Research International, 2020, 138(Pt A):109757.
[32] XIA X L, LUO Y, ZHANG Q W, et al.Mixed starter culture regulates biogenic amines formation via decarboxylation and transamination during Chinese rice wine fermentation[J].Journal of Agricultural and Food Chemistry, 2018, 66(25):6348-6356.
[33] 高亦豹, 王海燕, 徐岩.利用PCR-DGGE未培养技术对中国白酒高温和中温大曲细菌群落结构的分析[J].微生物学通报, 2010, 37(7):999-1004.
GAO Y B, WANG H Y, XU Y.PCR-DGGE analysis of the bacterial community of Chinese liquor high and medium temperature daqu[J].Microbiology China, 2010, 37(7):999-1004.
[34] SHARMA N, GUPTA A, GAUTAM N.Characterization of bacteriocin like inhibitory substance produced by a new strain Brevibacillus borstelensis AG1 isolated from ‘Marcha'[J].Brazilian Journal of Microbiology, 2014, 45(3):1007-1015.
[35] ZHENG X W, YAN Z, HAN B Z, et al.Complex microbiota of a Chinese “Fen” liquor fermentation starter (Fen-Daqu), revealed by culture-dependent and culture-independent methods[J].Food Microbiology, 2012, 31(2):293-300.
[36] ZHANG L Q, WU C D, DING X F, et al.Characterisation of microbial communities in Chinese liquor fermentation starters Daqu using nested PCR-DGGE[J].World Journal of Microbiology and Biotechnology, 2014, 30(12):3055-3063.
[37] LI H, LIAN B, DING Y H, et al.Bacterial diversity in the central black component of Maotai Daqu and its flavor analysis[J].Annals of Microbiology, 2014, 64(4):1659-1669.
[38] 周士越, 周欣, 张志锋, 等.未培养真菌分离培养方法初探[J].菌物学报, 2020, 39(4):766-776.
ZHOU S Y, ZHOU X, ZHANG Z F, et al.Attempt to isolate hitherto uncultured fungi[J].Mycosystema, 2020, 39(4):766-776.
[39] 梁晨, 杜海, 徐岩.大曲贮存过程中原核微生物群落结构及风味成分演替规律[J].微生物学通报, 2017, 44(2):384-393.
LIANG C, DU H, XU Y.The succession of procaryotic microbial community and the flavor components in the storage process of Daqu[J].Microbiology China, 2017, 44(2):384-393.
[40] WANG Y R, CAI W C, WANG W P, et al.Analysis of microbial diversity and functional differences in different types of high-temperature Daqu[J].Food Science & Nutrition, 2021, 9(2):1003-1016.
Outlines

/