Advancements in antibiotic resistance regulation by two-component regulatory systems in Gram-negative bacteria

  • LIU Huan ,
  • LIU Chang ,
  • LEI Huayu ,
  • CAO Juanjuan ,
  • WANG Yingying ,
  • ZHAO Yanni
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  • 1(School of Food Science and Engineering, Shaanxi University of Science and Technology, Xi’an 710021, China)
    2(Shaanxi Research Institute of Agricultural Products Processing Technology, Xi’an 710021, China)

Received date: 2024-08-29

  Revised date: 2024-09-23

  Online published: 2025-01-23

Abstract

The abuse of antibiotics has precipitated a persistent escalation in bacterial drug resistance and the detection rate of multidrug-resistant Gram-negative bacteria has been climbing, representing a grave threat to public health and engendering considerable risks within the realms of food production and processing.Two-component regulatory systems (TCSs) are widely present in the Gram-negative bacteria, consisting of the histidine kinase (HK) that senses signals and the corresponding response regulator protein (RR).It is an important signal transduction system in bacteria, widely involved in different physiological processes of bacteria, and plays pivotal roles in bacterial drug resistance.Hence, the intervention therapy targeting at TCSs is deemed a highly promising approach to overcome antibiotic resistance.This review elucidates the involvement of TCSs in orchestrating diverse mechanisms of antibiotic resistance, encompassing the regulation of antibiotic inactivating enzyme synthesis, alterations to the cell surface, modulation of drug influx and efflux, and other regulatory pathways.It underscores the advancements in our understanding of the regulatory functions in antibiotic resistance of TCSs in Gram-negative bacteria, with the objective of furnishing theoretical insights and references for the prevention and control of antibiotic-resistant food pathogens.

Cite this article

LIU Huan , LIU Chang , LEI Huayu , CAO Juanjuan , WANG Yingying , ZHAO Yanni . Advancements in antibiotic resistance regulation by two-component regulatory systems in Gram-negative bacteria[J]. Food and Fermentation Industries, 2025 , 51(1) : 381 -389 . DOI: 10.13995/j.cnki.11-1802/ts.040890

References

[1] IMAI Y, MEYER K J, IINISHI A, et al.A new antibiotic selectively kills Gram-negative pathogens[J].Nature, 2019, 576(7787):459-464.
[2] SONG M R, LIU Y, HUANG X Y, et al.A broad-spectrum antibiotic adjuvant reverses multidrug-resistant Gram-negative pathogens[J].Nature Microbiology, 2020, 5(8):1040-1050.
[3] GEMEDA B A, ASSEFA A, JALETA M B, et al.Antimicrobial resistance in Ethiopia:A systematic review and meta-analysis of prevalence in foods, food handlers, animals, and the environment[J].One Health, 2021, 13:100286.
[4] HALAWA E M, FADEL M, AL-RABIA M W, et al.Antibiotic action and resistance:Updated review of mechanisms, spread, influencing factors, and alternative approaches for combating resistance[J].Frontiers in Pharmacology, 2024, 14:1305294.
[5] SAUD B, PAUDEL G, KHICHAJU S, et al.Multidrug-resistant bacteria from raw meat of buffalo and chicken, Nepal[J].Veterinary Medicine International, 2019, 2019:7960268.
[6] LIU Q X, CHEN W J, ELBEDIWI M, et al.Characterization of Salmonella resistome and plasmidome in pork production system in Jiangsu, China[J].Frontiers in Veterinary Science, 2020, 7:617.
[7] KUMAR C B, RATHORE G.Assessment of freshwater fish farms for the identification of the geographical areas harbouring antimicrobial resistance[J].Aquaculture, 2024, 586:740808.
[8] KUMARAGE P M, MAJEED S, DE SILVA L A D S, et al.Detection of virulence, antimicrobial resistance, and heavy metal resistance properties in Vibrio anguillarum isolated from mullet (Mugil cephalus) cultured in Korea[J].Brazilian Journal of Microbiology, 2023, 54(1):415-425.
[9] SIDDIQUE M H, QAMAR M U, HAYAT S, et al.Polymicrobial multidrug-resistant bacteria isolated from street vended fresh fruit juices in Pakistan[J].British Food Journal, 2018, 120(6):1358-1365.
[10] DE GAETANO G V, LENTINI G, FAMÀ A, et al.Antimicrobial resistance:Two-component regulatory systems and multidrug efflux pumps[J].Antibiotics, 2023, 12(6):965.
[11] PAPON N, STOCK A M.Two-component systems[J].Current Biology:CB, 2019, 29(15):R724-R725.
[12] TIWARI S, JAMAL S B, HASSAN S S, et al.Two-component signal transduction systems of pathogenic bacteria As targets for antimicrobial therapy:An overview[J].Frontiers in Microbiology, 2017, 8:1878.
[13] TIERNEY A R, RATHER P N.Roles of two-component regulatory systems in antibiotic resistance[J].Future Microbiology, 2019, 14(6):533-552.
[14] MASI M, PINET E, PAGÈS J M.Complex response of the CpxAR two-component system to β-lactams on antibiotic resistance and envelope homeostasis in Enterobacteriaceae[J].Antimicrobial Agents and Chemotherapy, 2020, 64(6):e00291-20.
[15] AVISON M B, NIUMSUP P, NURMAHOMED K, et al.Role of the ‘cre/blr-tag’ DNA sequence in regulation of gene expression by the Aeromonas hydrophila beta-lactamase regulator, BlrA[J].The Journal of Antimicrobial Chemotherapy, 2004, 53(2):197-202.
[16] 徐超奕, 张婷, 蔡静晓, 等.革兰氏阴性菌中β-内酰胺酶诱导表达调控机制研究进展[J].生物工程学报, 2018, 34(8):1288-1296.
XU C Y, ZHANG T, CAI J X, et al.Progress in regulatory mechanism for inducing β-lactamase in Gram-negative bacteria[J].Chinese Journal of Biotechnology, 2018, 34(8):1288-1296.
[17] MOYA B, DÖTSCH A, JUAN C, et al.Beta-lactam resistance response triggered by inactivation of a nonessential penicillin-binding protein[J].PLoS Pathogens, 2009, 5(3):e1000353.
[18] LEE D J, PARK J, YI H, et al.A two-component-system-governed regulon that includes a β-lactamase gene is responsive to cell envelope disturbance[J].mBio, 2022, 13(4):e0174922.
[19] HUANG H H, WU B K, LI L H, et al.Role of the PhoPQ two-component regulatory system in the β-lactam resistance of Stenotrophomonas maltophilia[J].Journal of Antimicrobial Chemotherapy, 2021, 76(6):1480-1486.
[20] GOH B C, CHUA Y K, QIAN X L, et al.Crystal structure of the periplasmic sensor domain of histidine kinase VbrK suggests indirect sensing of β-lactam antibiotics[J].Journal of Structural Biology, 2020, 212(2):107610.
[21] LI L, WANG Q Y, ZHANG H, et al.Sensor histidine kinase is a β-lactam receptor and induces resistance to β-lactam antibiotics[J].Proceedings of the National Academy of Sciences of the United States of America, 2016, 113(6):1648-1653.
[22] SCHUREK K N, SAMPAIO J L M, KIFFER C R V, et al.Involvement of pmrAB and phoPQ in polymyxin B adaptation and inducible resistance in non-cystic fibrosis clinical isolates of Pseudomonas aeruginosa[J].Antimicrobial Agents and Chemotherapy, 2009, 53(10):4345-4351.
[23] PUJA H, BOLARD A, NOGUÈS A, et al.The efflux pump MexXY/OprM contributes to the tolerance and acquired resistance of Pseudomonas aeruginosa to colistin[J].Antimicrobial Agents and Chemotherapy, 2020, 64(4):e02033-19.
[24] 于永峰, 权衡, 董文豪, 等.双组分调控系统介导革兰阴性菌耐药的作用机制[J].畜牧兽医学报, 2022, 53(6):1689-1701.
YU Y F, QUAN H, DONG W H, et al.The mechanism of two-component regulatory system mediating drug resistance of gram-negative bacteria[J].Acta Veterinaria et Zootechnica Sinica, 2022, 53(6):1689-1701.
[25] KIDD T J, MILLS G, SÁ-PESSOA J, et al.A Klebsiella pneumoniae antibiotic resistance mechanism that subdues host defences and promotes virulence[J].EMBO Molecular Medicine, 2017, 9(4):430-447.
[26] MURTHA A N, KAZI M I, SCHARGEL R D, et al.High-level carbapenem tolerance requires antibiotic-induced outer membrane modifications[J].PLoS Pathogens, 2022, 18(2):e1010307.
[27] KO S Y, KIM N, PARK S Y, et al.Acinetobacter baumannii under acidic conditions induces colistin resistance through PmrAB activation and lipid A modification[J].Antibiotics, 2023, 12(5):813.
[28] MOUSLIM C, GROISMAN E A.Control of the Salmonella ugd gene by three two-component regulatory systems[J].Molecular Microbiology, 2003, 47(2):335-344.
[29] MENG J, YOUNG G, CHEN J Y.The rcs system in Enterobacteriaceae:Envelope stress responses and virulence regulation[J].Frontiers in Microbiology, 2021, 12:627104.
[30] LIU J Q, XIAO G, ZHOU W P, et al.Various novel colistin resistance mechanisms interact to facilitate adaptation of Aeromonas hydrophila to complex colistin environments[J].Antimicrobial Agents and Chemotherapy, 2021, 65(7):e0007121.
[31] CAI S J, INOUYE M.EnvZ-OmpR interaction and osmoregulation in Escherichia coli[J].The Journal of Biological Chemistry, 2002, 277(27):24155-24161.
[32] RODRIGUES I C, RODRIGUES S C, DUARTE F V, et al.The role of outer membrane proteins in UPEC antimicrobial resistance:A systematic review[J].Membranes, 2022, 12(10):981.
[33] KO D, CHOI S H.Mechanistic understanding of antibiotic resistance mediated by EnvZ/OmpR two-component system in Salmonella enterica serovar Enteritidis[J].Journal of Antimicrobial Chemotherapy, 2022, 77(9):2419-2428.
[34] SRINIVASAN V B, VENKATARAMAIAH M, MONDAL A, et al.Functional characterization of a novel outer membrane porin KpnO, regulated by PhoBR two-component system in Klebsiella pneumoniae NTUH-K2044[J].PLoS One, 2012, 7(7):e41505.
[35] MACFARLANE E L A, KWASNICKA A, OCHS M M, et al.PhoP-PhoQ homologues in Pseudomonas aeruginosa regulate expression of the outer-membrane protein OprH and polymyxin B resistance[J].Molecular Microbiology, 1999, 34(2):305-316.
[36] LIN M F, LIN Y Y, LAN C Y.The role of the two-component system BaeSR in disposing chemicals through regulating transporter systems in Acinetobacter baumannii[J].PLoS One, 2015, 10(7):e0132843.
[37] 袁茂冉, 葛宏华, 马金鸣.鲍曼不动杆菌外排泵介导多药耐药性[J].中国生物化学与分子生物学报, 2020, 36(11):1295-1302.
YUAN M R, GE H H, MA J M.Efflux pumps mediate multidrug resistance in Acinetobacter baumannii[J].Chinese Journal of Biochemistry and Molecular Biology, 2020, 36(11):1295-1302.
[38] HIRAKAWA H, NISHINO K, YAMADA J, et al.Beta-lactam resistance modulated by the overexpression of response regulators of two-component signal transduction systems in Escherichia coli[J].The Journal of Antimicrobial Chemotherapy, 2003, 52(4):576-582.
[39] LI D Y, HAN J T, ZHANG M Y, et al.The two-component system RstA/RstB regulates expression of multiple efflux pumps and influences anaerobic nitrate respiration in Pseudomonas fluorescens[J].mSystems, 2021, 6(6):e0091121.
[40] LIU M C, TSAI Y L, HUANG Y W, et al.Stenotrophomonas maltophilia PhoP, a two-component response regulator, involved in antimicrobial susceptibilities[J].PLoS One, 2016, 11(5):e0153753.
[41] CHEN D J, ZHAO Y N, QIU Y Q, et al.CusS-CusR two-component system mediates tigecycline resistance in carbapenem-resistant Klebsiella pneumoniae[J].Frontiers in Microbiology, 2020, 10:3159.
[42] DIEPPOIS G, DUCRET V, CAILLE O, et al.The transcriptional regulator CzcR modulates antibiotic resistance and quorum sensing in Pseudomonas aeruginosa[J].PLoS One, 2012, 7(5):e38148.
[43] MULLER C, PLÉSIAT P, JEANNOT K. A two-component regulatory system interconnects resistance to polymyxins, aminoglycosides, fluoroquinolones, and β-lactams in Pseudomonas aeruginosa[J]. Antimicrobial Agents and Chemotherapy, 2011, 55(3): 1211-1221.
[44] LI L F, MA J Y, CHENG P, et al.Roles of two-component regulatory systems in Klebsiella pneumoniae:Regulation of virulence, antibiotic resistance, and stress responses[J].Microbiological Research, 2023, 272:127374.
[45] MA K, WANG H, LV Z F, et al.The two-component system CpxRA affects antibiotic susceptibility and biofilm formation in avian pathogenic Escherichia coli[J].Animals, 2023, 13(3):383.
[46] PÉREZ-PALACIOS P, RODRÍGUEZ-OCHOA J L, VELÁZQUEZ-ESCUDERO A, et al.Implications of two-component systems EnvZ/OmpR and BaeS/BaeR in in vitro temocillin resistance in Escherichia coli[J].Journal of Antimicrobial Chemotherapy, 2024, 79(3):641-647.
[47] WANG S, YOU C, MEMON F Q, et al. BaeR participates in cephalosporins susceptibility by regulating the expression level of outer membrane proteins in Escherichia coli[J]. The Journal of Biochemistry, 2021, 169(1): 101-108.
[48] GUPTA K, MARQUES C N H, PETROVA O E, et al.Antimicrobial tolerance of Pseudomonas aeruginosa biofilms is activated during an early developmental stage and requires the two-component hybrid SagS[J].Journal of Bacteriology, 2013, 195(21):4975-4987.
[49] YU L M, WANG H, HAN X G, et al.The two-component system, BasSR, is involved in the regulation of biofilm and virulence in avian pathogenic Escherichia coli[J].Avian Pathology, 2020, 49(6):532-546.
[50] RICHMOND G E, EVANS L P, ANDERSON M J, et al.The Acinetobacter baumannii two-component system AdeRS regulates genes required for multidrug efflux, biofilm formation, and virulence in a strain-specific manner[J].mBio, 2016, 7(2):e00430-16.
[51] MA Y, ZHANG Y Y, SHAN Z G, et al.Involvement of PhoP/PhoQ two-component system in biofilm formation in Cronobacter sakazakii[J].Food Control, 2022, 133:108621.
[52] WANG Y D, GONG J S, GUAN Y C, et al.OmpR (TCS response regulator) of Aeromonas veronii plays a major role in drug resistance, stress resistance and virulence by regulating biofilm formation[J].Microbial Pathogenesis, 2023, 181:106176.
[53] LI W C, XUE M, YU L M, et al.QseBC is involved in the biofilm formation and antibiotic resistance in Escherichia coli isolated from bovine mastitis[J].PeerJ, 2020, 8:e8833.
[54] BAŞKAN C, YıLDıRıM T, BILGIN M, et al.Determination of biofilm formation, antibiotic susceptibility profiles and quorum sensing mediated virulence factors in ceftazidime resistant Pseudomonas aeruginosa[J].Biologia, 2023, 78(10):2881-2893.
[55] DE BENTZMANN S, GIRAUD C, BERNARD C S, et al.Unique biofilm signature, drug susceptibility and decreased virulence in Drosophila through the Pseudomonas aeruginosa two-component system PprAB[J].PLoS Pathogens, 2012, 8(11):e1003052.
[56] RUSSO T A, MANOHAR A, BEANAN J M, et al.The response regulator BfmR is a potential drug target for Acinetobacter baumannii[J].mSphere, 2016, 1(3):e00082-16.
[57] DÖRR T, ALVAREZ L, DELGADO F, et al.A cell wall damage response mediated by a sensor kinase/response regulator pair enables beta-lactam tolerance[J].Proceedings of the National Academy of Sciences of the United States of America, 2016, 113(2):404-409.
[58] SHIN J H, CHOE D, RANSEGNOLA B, et al.A multifaceted cellular damage repair and prevention pathway promotes high-level tolerance to β-lactam antibiotics[J].EMBO Reports, 2021, 22(2):e51790.
[59] SHERMAN M E, SMITH R D, GARDNER F M, et al.A sensitive GC-MS method for quantitation of lipid A backbone components and terminal phosphate modifications[J].Journal of the American Society for Mass Spectrometry, 2022, 33(12):2301-2309.
[60] NIKAIDO H. Molecular basis of bacterial outer membrane permeability revisited[J]. Microbiology and Molecular Biology Reviews, 2003, 67(4): 593-656.
[61] HUANG J Y, LI C, SONG J N, et al.Regulating polymyxin resistance in gram-negative bacteria:Roles of two-component systems PhoPQ and PmrAB[J].Future Microbiology, 2020, 15(6):445-459.
[62] GRANDE R, PUCA V, MURARO R.Antibiotic resistance and bacterial biofilm[J].Expert Opinion on Therapeutic Patents, 2020, 30(12):897-900.
[63] GADDY J A, ACTIS L A.Regulation of Acinetobacter baumannii biofilm formation[J].Future Microbiology, 2009, 4(3):273-278.
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