为克隆扁果枸杞(Lycium barbarum Bianguo)肌动蛋白基因作为基因表达模式分析的内参基因,根据几种茄科植物肌动蛋白氨基酸序列保守区设计引物,以扁果枸杞3周龄叶总RNA 为模板,采用RT-PCR 的方法扩增肌动蛋白基因片段并连接到pMD18-T载体上,阳性克隆经PCR 检测后测序。结果表明,该基因片段长598 bp,编码198个氨基酸,与枸杞(Lycium chinense)核苷酸序列的相似度和同源性分别达97%和100%,说明是肌动蛋白基因片段,命名为LbACT。荧光定量PCR分析表明,盐处理下LbACT基因在各器官中的Ct值稳定,可作为内参基因用于研究扁果枸杞功能基因的表达模式分析。
The gene encoding actin was cloned from Lycium barbarum Bianguo and checked to be a potential reference gene to analyze the expression levels of other genes. The primers were designed based on conserved sequences of actin genes from other Solanaceae plants. The total RNA isolated from leaves of Lycium barbarum Bianguo was used as a template for reverse transcription-polymerase chain reaction (RT-PCR). The nucleotide fragment was amplified and cloned into pMD18-T. The positive clones were identified by PCR, followed by sequencing. The results revealed that the amplified fragment, named as LbACT, contained 598 bp, encoded 198 amino acid residues. The nucleotide sequence was 97% similar to that of Lycium chinense actin gene. Meanwhile, fluorescent quantitative PCR showed that salt-treated LbACT was stable in all organs. Therefore, LbACT could be used as a reference gene to analyze the expressions of functional genes of Lycium barbarum Bianguo.
[1] 王益民,张珂,许飞华,等. 不同品种枸杞子营养成分分析及评价[J].食品科学,2014,35(1):34-38.
[2] KULCZYN′SKI B, GRAMZAMICHALOWSKA A. Goji berry (Lycium barbarum): Composition and health effects-a review [J]. Polish Journal of Food & Nutrition Sciences, 2016, 66(2):67-76.
[3] YAO R, HEINRICH M, WANG Z, et al. Quality control of goji (fruits of Lycium barbarum L. and L. chinense Mill.): A value chain analysis perspective.[J]. Journal of Ethnopharmacology, 2018, 10(5):508-520.
[4] 袁惠君,刘轲,王春梅,等. 两个宁夏枸杞品种的耐渗透胁迫和耐盐特征比较[J].草业科学,2016,33(4):681-690.
[5] 刘曦,张少斌,汪澈.植物肌动蛋白功能的研究进展[J].生物技术通报,2010(3):13-16.
[6] 王洪振,程焉平.细胞核内肌动蛋白参与基因转录的研究进展[J].吉林师范大学学报:自然科学版,2005,26(2):34-36.
[7] 丁铃,李军,周涛,等. 太子参3个肌动蛋白基因片段的克隆与序列分析[J].中草药, 2016, 47(11):1 935-1 942.
[8] FU W, XIE W, ZHANG Z, et al. Exploring valid reference genes for quantitative real-time PCR analysis in Plutella xylostella (Lepidoptera:Plutellidate). International Journal of Biological Sciences, 2013, 9 (8):792-802.
[9] XU R, ZHENG X. Selection of reference genes for quantitative real-time PCR in Octopus minor (Cephalopoda: Octopoda) under acute ammonia stress[J]. Environmental Toxicology & Pharmacology, 2018, 60:76-81.
[10] MEAGHER R B, MCKINNEY E C, Kandasamy M K. Isovariant dynamics expand and buffer the responses of complex systems: The diverse plant actin gene family [J]. Plant Cell, 1999, 11(6):995-1 005.
[11] DROUIN G, DOVER G A. A plant processed pseudogene [J]. Nature, 1987, 328(6 130):557-558.
[12] BERNATZKY R, TANKSLEY S D. Genetics of actin-related sequences in tomato [J]. Theoretical & Applied Genetics, 1986, 72(3):314-321.
[13] KANDASAMY M K, GILLILAND L U, MCKINNEY E C, et al. One plant actin isovariant, ACT7, is induced by auxin and required for normal callus formation [J]. Plant Cell, 2001, 13(7):1 541-1 554.
[14] JIANG Y, ZHAO W. Expression and phylogenetic analysis of pea actin isoforms [J]. Acta Botanica Sinica, 2002, 44(12):1 456-1 461.
[15] 张少斌,刘国琴. 植物肌动蛋白异型体研究进展[J]. 植物学报, 2006, 23(3):242-248.
[16] 陈清华,王朝良. 宁夏枸杞产业发展优势和提升出口竞争力的对策[J]. 农业现代化研究, 2008, 29(2):151-154.
[17] 张惠玲. 枸杞的综合开发与利用[J]. 食品研究与开发, 2012, 33(2):223-227.
[18] HYE W L, YOUNG H K, YUN H K, et al.Discrimination of Lycicum chinense and Lycium barbarum by taste pattern and betaine analysis[J]. International Journal of Clinical & Experimental Medicine, 2014, 7(8): 2 053-2 059.
[19] 郑国琦,胡正海. 宁夏枸杞的生物学和化学成分的研究进展[J]. 中草药, 2008, 39(5):796-796.
[20] YAO R, HEINRICH M, ZOU Y, et al. Quality variation of Goji (Fruits of Lycium spp.) in China: A comparative morphological and metabolomic analysis[J]. Frontiers in Pharmacology, 2018, 9:151.