分析与检测

利用扩增子测序技术分析不同红茶菌中微生物多样性

  • 黎琪 ,
  • 王晴 ,
  • 檀馨悦 ,
  • 李晓敏 ,
  • 张晓琳
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  • 1(中粮营养健康研究院有限公司,北京,102209)
    2(营养健康与食品安全北京市重点实验室,北京,102209)
    3(老年营养食品研究北京市工程实验室,北京,102209)
学士,助理工程师(张晓琳研究员为通讯作者,E-mail:zhangxiaolin1@cofco.com)

收稿日期: 2021-01-21

  修回日期: 2021-03-03

  网络出版日期: 2021-10-18

基金资助

主食糖脂代谢营养调控关键技术研究与应用(D171100008017002)

Analysis of microbial diversity from different kombucha using amplicon sequencing

  • LI Qi ,
  • WANG Qing ,
  • TAN Xinyue ,
  • LI Xiaomin ,
  • ZHANG Xiaolin
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  • 1(COFCO Nutrition and Health Research Institute, Beijing 102209, China)
    2(Beijing Key Laboratory of Nutrition & Health and Food Safety, Beijing 102209, China)
    3(Beijing Engineering Laboratory of Geriatric Nutrition & Food, Beijing 102209, China)

Received date: 2021-01-21

  Revised date: 2021-03-03

  Online published: 2021-10-18

摘要

为探究红茶菌中的优势菌群及其饮品风味与微生物之间的关联性,采用扩增子测序技术研究11个不同来源的红茶菌样品中微生物多样性,并基于感官评价对物种进行聚类分析。结果表明,11个红茶菌样品中的优势细菌均为葡糖醋杆菌属(相对丰度85.40%~99.56%),其次为假单胞菌属(相对丰度<14%);而不同红茶菌样品中优势真菌表现不同,样品SD1、SD10、SX11和SY6中优势菌属为接合酵母属(相对丰度95.43%~99.99%),样品BJ4和GD9中优势菌属为假丝酵母属(相对丰度40.54%和97.40%),样品AH7、AH8、AJ2、BJ3和XJ5中优势菌属为酒香酵母属(相对丰度54.81%~74.09%)。非优势细菌和优势真菌不同程度地影响红茶菌的风味。扩增子测序技术较为全面准确地分析了红茶菌样品中的微生物多样性,为工业化生产红茶菌饮品提供理论依据。

本文引用格式

黎琪 , 王晴 , 檀馨悦 , 李晓敏 , 张晓琳 . 利用扩增子测序技术分析不同红茶菌中微生物多样性[J]. 食品与发酵工业, 2021 , 47(18) : 267 -274 . DOI: 10.13995/j.cnki.11-1802/ts.026793

Abstract

To explore the dominant species of kombucha and the relations between its flavor and microorganisms, the microbial diversity of 11 kombucha samples from different sources was studied by amplicon sequencing, and the clustering components based on sensory evaluation were analyzed. The results showed that the most dominant bacterial genus in all kombucha samples was Gluconacetobacter (relative frequency accounted for 85.40%-99.56%), followed by Pseudomonas (relative frequency accounted for <14%); while the dominant fungal genus in sample SD1, SD10, SX11 and SY6 was Zygosaccharomyces (relative frequency accounted for 95.43%-99.99%), in sample BJ4 and GD9 was Candidas (relative frequency accounted for 40.54% and 97.40%), in sample AH7, AH8, AJ2, BJ3 and XJ5 was Brettanomyces (relative frequency accounted for 54.81%-74.09%). Both non-dominant bacteria and dominant fungi affected the flavor of kombucha differently. Amplicon sequencing technology can analyze the microbial diversity of kombucha samples comprehensively and accurately, which lays the foundation for the large-scale industrial production of kombucha beverages.

参考文献

[1] VILLARREAL-SOTO S A,BEAUFORT S,BOUAJILA J,et al.Understanding kombucha tea fermentation:A review[J].Journal of Food Science,2018,83(3):580-588.
[2] MARTÍNEZ LEAL J,VALENZUELA SUÁREZ L,JAYABALAN R, et al.A review on health benefits of kombucha nutritional compounds and metabolites [J].CyTA- Journal of Food,2018,16(1):390-399.
[3] 李晓敏,王晴,檀馨悦,等.红茶菌成分及功能研究进展[J].中国酿造,2020,39(10):5-10.
LI X M,WANG Q,TAN X Y,et al.Research progress on composition and functions of kombucha[J].China Brewing,2020,39(10):5-10.
[4] HAGHMORAD D,YAZDANPANAH E,SADIGHIMOGHADDAM B, et al.Kombucha ameliorates experimental autoimmune encephalomyelitis through activation of Treg and Th2 cells[J].Acta Neurologica Belgica,2020.DOI:10.1007/S13760-020-01475-3.
[5] 李如意,尹军峰,邹纯.红茶菌的国内外研究现状[J].浙江农业学报,2020,32(12):2 291-2 302.
LI R Y,YIN J F,ZOU C.Research status of kombucha in the world[J].Acta Agriculturae Zhejiangensis,2020,32(12):2 291-2 302.
[6] 王春龙.红茶菌发酵饮料中的菌群分析与功能评价[D].天津:天津科技大学,2017.
WANG C L.Microflora analysis and functional evaluation of kombucha fermented beverage[D].Tianjin:Tianjin University of Science & Technology,2017.
[7] CHAKRAVORTY S,BHATTACHARYA S,CHATZINOTAS A,et al.Kombucha tea fermentation:Microbial and biochemical dynamics[J].International Journal of Food Microbiology,2016,220:63-72.
[8] ZHAO Z J,SUI Y C,WU H W,et al.Flavour chemical dynamics during fermentation of kombucha tea[J].Emirates Journal of Food and Agriculture,2018,30(9):732-741.
[9] 邱卫华.红茶菌微生物群落多样性及其分析方法的研究进展[J].食品工业科技,2019,40(24):311-317.
QIU W H.Research advances on microbial diversity and its analytical methods of kombucha[J].Science and Technology of Food Industry,2019,40(24):311-317.
[10] MCCABE M S, CORMICAN P, KEOGH K,et al.Illumina MiSeq phylogenetic amplicon sequencing shows a large reduction of an uncharacterised succinivibrionaceae and an increase of the methanobrevibacter gottschalkii clade in feed restricted cattle[J].PLoS One,2015,10(1):133-234.
[11] 张泽生,王春龙,刘清岱,等.扩增子测序技术分析红茶菌中优势微生物的研究[J].食品研究与开发,2016,37(16):185-188.
ZHANG Z S,WANG C L,LIU Q D,et al.Study on analysis of the dominant microorganisms in kombucha by the technology of amplicon sequencing [J].Food Research And Development,2016,37(16):185-188.
[12] POLLOCK J,GLENDINNING L,WISEDCHANWET T,et al.The madness of microbiome:Attempting to find consensus "best practice" for 16S microbiome studies[J].Appl Environ Microbiol,2018,84(7):02627-17.
[13] 刘建利,孙敏,曹晓虹,等.利用高通量测序技术分析民间面引子中的真菌多样性[J].食品科学,2018,39(22):186-194.
LIU J L,SUN M,CAO X H,et al.Analysis of fungal diversity in homemade sourdough starters using high-throughput sequencing[J].Food Science,2018,39(22):186-194.
[14] ERCOLINI D.High-throughput sequencing and metagenomics:Moving forward in the culture-independent analysis of food microbial ecology[J].Applied & Environmental Microbiology,2013,79(10):3 148-3 155.
[15] MARSH A J,O′SULLIVAN O,et al.Sequence-based analysis of the bacterial and fungal compositions of multiple kombucha (tea fungus) samples[J].Food Microbiology,2014,38(1):171-178.
[16] 檀馨悦,黎琪,王晴,等.红茶菌中风味物质相关功能微生物的研究进展[J].食品科学,2020,41(11):327-335.
TAN X Y,LI Q,WANG Q,et al.Progresses in functional microorganisms associated with flavor compounds in kombucha tea[J].Food Science,2020,41(11):327-335.
[17] WANG Z M,LU Z M,SHI J S,et al.Exploring flavour-producing core microbiota in multispecies solid-state fermentation of traditional chinese vinegar[J].Scientific Reports,2016.DOI:10.1038/srep26818.
[18] 王洁琛,陈志周,王颖,等.红茶菌中醋酸菌和酵母菌的分离鉴定及其相互作用[J].中国酿造,2020,39(3):126-130.
WANG J C,CHEN Z Z,WANG Y,et al.Isolation,identification and interaction of acetic acid bacteria and yeast in kombucha[J].China Brewing,2020,39(3):126-130.
[19] ARIKAN M ,MITCHELL A L,FINN R D,et al.Microbial composition of kombucha determined using amplicon sequencing and shotgun metagenomics[J].Journal of Food Science,2020,85(2):455-464.
[20] 陈立杰,王旭,王媛媛,等.单齿目线虫的分类及其生防潜力研究进展[C].第十届全国植物线虫学学术研讨会论文集.北京:中国植物病理学会,2010.
CHEN L J,WANG X,WANG Y Y,et al.Review of mononchida on taxonomy and biocontrol of plant nematodes[C].Proceedings of Tenth National Symposium on Plant Nematodes.Beijing:Chinese Society for Plant Pathology, 2010.
[21] TRAN T,GRANDVALET C, VERDIER F,et al.Microbial dynamics between yeasts and acetic acid bacteria in kombucha:Impacts on the chemical composition of the beverage[J].Foods,2020,9(7):963.
[22] 苏家跃,马小倩,刘素华,等.红茶菌中优势菌种的分离鉴定和发育树分析[J].中国食品添加剂,2015(10):110-116.
SU J Y,MA X Q,LIU S H,et al.Isolation and identification of predominant microbes from kombucha and its phylogenic tree analysis [J].China Food Additives,2015(10):110-116.
[23] 蒋立文.红茶菌优势微生物的分离、鉴定及抗菌机理的研究[D].长沙:湖南农业大学,2007.
JIANG L W.Studies on isolation and identification of predominant microbes from kombucha and their anti-microbes mechanism[D].Changsha:Hunan Agricultural University,2007.
[24] 林娟,叶秀云,曹泽丽,等."红茶菌"中微生物的分离及纯菌混合发酵生产[J].中国食品学报,2015,15(2):39-48.
LIN J,YE X Y,CAO Z L,et al.Isolation of microbes from kombucha and kombucha fermentation with pure culture combinations[J].Journal of Chinese Institute of Food Science and Technology,2015,15(2):39-48.
[25] WANG S, ZHANG L M,QI L B,et al.Effect of synthetic microbial community on nutraceutical and sensory qualities of kombucha[J].International Journal of Food Science & Technology,2020,55(10):3 327-3 333.
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