研究报告

毕赤酵母PAS_chr4_0427基因敲除促进神经酰胺合成

  • 黄铭 ,
  • 吴佳欣 ,
  • 张目 ,
  • 王水平 ,
  • 胡晓清
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  • 1(江南大学 生物工程学院,江苏 无锡,214122)
    2(广州悦荟化妆品有限公司,广东 广州,510000)
第一作者:硕士研究生(胡晓清副教授为通信作者,E-mail:xiaoqinghu@jiangnan.edu.cn)

收稿日期: 2024-04-16

  修回日期: 2024-05-17

  网络出版日期: 2024-10-10

基金资助

国家重点研发计划政府间国际科技创新合作项目(2023YFE0104400)

Knockout of PAS_chr4_0427 promotes ceramide synthesis in Pichia pastoris

  • HUANG Ming ,
  • WU Jiaxin ,
  • ZHANG Mu ,
  • WANG Shuiping ,
  • HU Xiaoqing
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  • 1(School of Biotechnology, Jiangnan University, Wuxi 214122, China)
    2(Guangzhou Yuehui Cosmetics Co.Ltd., Guangzhou 510000, China)

Received date: 2024-04-16

  Revised date: 2024-05-17

  Online published: 2024-10-10

摘要

神经酰胺是应用于化妆品和药品的一类脂质分子,利用微生物代谢工程合成神经酰胺具有重要前景。巴斯德毕赤酵母(Pichia pastoris)是优良的工业宿主,目前尚无利用P.pastoris强化神经酰胺的研究。首先构建P.pastoris GS115ΔPAS_chr3_0329(G-K)作为底盘,然后在G-K中敲除神经酰胺合成负反馈基因PAS_chr4_0427(G-KO),并利用脂质组学技术探究神经酰胺的组成及含量变化。结果表明,与G-K相比,G-KO中神经酰胺在总脂质中相对含量增加了628.13%,达到9.32%;并促进合成更多具有不饱和长链碱基的神经酰胺。与此同时,G-KO中鞘脂相对含量增加,而磷脂相对含量降低。对P.pastoris中神经酰胺丰度最高的Cer(d18∶0)神经酰胺进行HPLC分析,显示G-KO中Cer(d18∶0)神经酰胺合成量达90.22 mg/L,相比G-K提升了872.20%。该研究证实P.pastoris可用于神经酰胺合成,PAS_chr4_0427缺失株G-KO具有良好的神经酰胺合成能力,具有工业发酵制备神经酰胺的潜力。

本文引用格式

黄铭 , 吴佳欣 , 张目 , 王水平 , 胡晓清 . 毕赤酵母PAS_chr4_0427基因敲除促进神经酰胺合成[J]. 食品与发酵工业, 2024 , 50(17) : 17 -22 . DOI: 10.13995/j.cnki.11-1802/ts.039574

Abstract

Ceramide is a class of lipid molecules used in cosmetics and pharmaceuticals.The synthesis of ceramide by microbial metabolic engineering has important prospects.Pichia pastoris is an excellent industrial host.At present, there is no report on the use of P.pastoris to enhance synthesis of ceramide.Firstly, P.pastoris GS115ΔPAS_chr3_0329 (G-K) was constructed as the chassis, and then the ceramide synthesis negative feedback gene PAS_chr4_0427 was knocked out in G-K to obtain G-KO, and the composition and content of ceramide were investigated by lipidomics.Results showed that compared with G-K, the relative content of ceramide in total lipid in G-KO increased by 628.13% to 9.32%.Moreover, the deletion of gene PAS_chr4_0427 promoted the synthesis of more ceramides with unsaturated long-chain bases.At the same time, the relative content of sphingolipids in G-KO increased, while the relative content of phospholipids decreased.HPLC analysis of Cer(d18∶0) ceramide with the highest ceramide abundance in P.pastoris showed that the content of Cer(d18∶0) ceramide in G-KO reached 90.22 mg/L, which was 872.20% higher than that of G-K.This study confirmed that P.pastoris could be used for ceramide synthesis.The PAS_chr4_0427 deletion strain G-KO has excellent ceramide synthesis ability and has the potential for industrial fermentation to prepare ceramide.

参考文献

[1] CANALS D, SALAMONE S, HANNUN Y A.Visualizing bioactive ceramides[J].Chemistry and Physics of Lipids, 2018, 216:142-151.
[2] ALIZADEH J, DA SILVA ROSA S C, WENG X H, et al.Ceramides and ceramide synthases in cancer:Focus on apoptosis and autophagy[J].European Journal of Cell Biology, 2023, 102(3):151337.
[3] UCHIDA Y, PARK K.Ceramides in skin health and disease:An update[J].American Journal of Clinical Dermatology, 2021, 22(6):853-866.
[4] VENTURA A E, MESTRE B, SILVA L C.Ceramide domains in health and disease:A biophysical perspective[J].Advances in Experimental Medicine and Biology, 2019, 1159:79-108.
[5] ZHU F F, ZHAO B, HU B, et al.Review of available "extraction+purification" methods of natural ceramides and their feasibility for sewage sludge analysis[J].Environmental Science and Pollution Research, 2023, 30(26):68022-68053.
[6] 林会兰. 酵母神经酰胺的提取、分析和表达[D].北京:清华大学, 2002.
LIN H L.Extraction, analysis and expression of yeast ceramide[D].Beijing:Tsinghua University, 2002.
[7] 张琳. 酵母神经酰胺的提取、分析及生产的研究[D].长春:吉林大学, 2002.
ZHANG L.Study on extraction, analysis and production of yeast ceramide[D].Changchun:Jilin University, 2002.
[8] KIM S K, NOH Y H, KOO J R, et al.Effect of expression of genes in the sphingolipid synthesis pathway on the biosynthesis of ceramide in Saccharomyces cerevisiae[J].Journal of Microbiology and Biotechnology, 2010, 20(2):356-362.
[9] MURAKAMI S, SHIMAMOTO T, NAGANO H, et al.Producing human ceramide-NS by metabolic engineering using yeast Saccharomyces cerevisiae[J].Scientific Reports, 2015, 5:16319.
[10] SCHORSCH C, KÖHLER T, ANDREA H, et al.High-level production of tetraacetyl phytosphingosine (TAPS) by combined genetic engineering of sphingoid base biosynthesis and L-serine availability in the non-conventional yeast Pichia ciferrii[J].Metabolic Engineering, 2012, 14(2):172-184.
[11] HAN C, JANG M, KIM M J, et al.Engineering Yarrowia lipolytica for de novo production of tetraacetyl phytosphingosine[J].Journal of Applied Microbiology, 2021, 130(6):1981-1992.
[12] DICKSON R C.Thematic review series:Sphingolipids.New insights into sphingolipid metabolism and function in budding yeast[J].Journal of Lipid Research, 2008, 49(5):909-921.
[13] BRESLOW D K, COLLINS S R, BODENMILLER B, et al.Orm family proteins mediate sphingolipid homeostasis[J].Nature, 2010, 463(7284):1048-1053.
[14] LIU M, HUANG C J, POLU S R, et al.Regulation of sphingolipid synthesis through Orm1 and Orm2 in yeast[J].Journal of Cell Science, 2012, 125(Pt 10):2428-2435.
[15] GURURAJ C, FEDERMAN R S, CHANG A.Orm proteins integrate multiple signals to maintain sphingolipid homeostasis[J].The Journal of Biological Chemistry, 2013, 288(28):20453-20463.
[16] JONES J W, CARTER C L, LI F, et al.Ultraperformance convergence chromatography-high resolution tandem mass spectrometry for lipid biomarker profiling and identification[J].Biomedical Chromatography:BMC, 2017, 31(3):10.1002/bmc.3822.
[17] LÕOKE M, KRISTJUHAN K, KRISTJUHAN A.Extraction of genomic DNA from yeasts for PCR-based applications[J].BioTechniques, 2011, 50(5):325-328.
[18] HEIN E M, HAYEN H.Comparative lipidomic profiling of S.cerevisiae and four other hemiascomycetous yeasts[J].Metabolites, 2012, 2(1):254-267.
[19] SANTANA P, RUIZ DE GALARRETA C M, FANJUL L F.Sphingomyelin and ceramide mass assay[J].Methods in Molecular Biology, 1998, 105:223-231.
[20] WENINGER A, FISCHER J E, RASCHMANOVÁ H, et al.Expanding the CRISPR/Cas9 toolkit for Pichia pastoris with efficient donor integration and alternative resistance markers[J].Journal of Cellular Biochemistry, 2018, 119(4):3183-3198.
[21] TERNES P, WOBBE T, SCHWARZ M, et al.Two pathways of sphingolipid biosynthesis are separated in the yeast Pichia pastoris[J]. Journal of Biological Chemistry, 2011, 286(13):11401-11414.
[22] HAN S M, LONE M A, SCHNEITER R, et al.Orm1 and Orm2 are conserved endoplasmic reticulum membrane proteins regulating lipid homeostasis and protein quality control[J].Proceedings of the National Academy of Sciences of the United States of America, 2010, 107(13):5851-5856.
[23] WANG W, XIN J X, YANG X, et al.Lipid-gene regulatory network reveals coregulations of triacylglycerol with phosphatidylinositol/lysophosphatidylinositol and with hexosyl-ceramide[J].Biochimica et Biophysica Acta.Molecular and Cell Biology of Lipids, 2019, 1864(2):168-180.
[24] JANI S, DA EIRA D, HADDAY I, et al.Distinct mechanisms involving diacylglycerol, ceramides, and inflammation underlie insulin resistance in oxidative and glycolytic muscles from high fat-fed rats[J].Scientific Reports, 2021, 11(1):19160.
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